PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010919696.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TCP
Protein Properties Length: 390aa    MW: 42505.8 Da    PI: 7.0297
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010919696.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1142.1e-3561153282
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssasec...eaess 78 
                     +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL++ ak ai+el+++               +      +   +++++
  XP_010919696.1  61 TGRKDRHSKVCTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKHAKGAIDELAELprwyppaatyasssnP------SpppNQHDH 149
                     79**************************************************************8877776655432221......121112221 PP

             TCP  79 sssa 82 
                        +
  XP_010919696.1 150 LHDQ 153
                     1111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.2E-3161138IPR005333Transcription factor, TCP
PROSITE profilePS5136933.22663121IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MEESPPHHHH HHSHDEQKLL HHHNHHHHQQ RPPPHNSRLG TLREGGGQVV EVAGGHIVRS  60
TGRKDRHSKV CTAKGLRDRR VRLSAHTAIQ FYDVQDRLGY DRPSKAVDWL IKHAKGAIDE  120
LAELPRWYPP AATYASSSNP SPPPNQHDHL HDQPVPTEPS AEQAAYSTGN FLPPPLDSDS  180
IADTIKTFFP LATTTASSSY QNHHPPDLLS RSSSQVQDLR LSLQSFQDPM FHQNQIPTAS  240
SQQNFLPGYL AFDATSASWP EQNQRIVAWN VAETSSGEGG GGYGFNMPPP QTVPLHPALG  300
QSQLLSQRGT LQSSILPSVR AWMDPIAAAA GHQIHPAGVH SSSPSVTTTG FVFSGDGGFS  360
GFHIPARIQG EEEHGCIPGK PPSDSSASNQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919696.10.0PREDICTED: transcription factor TCP4-like
RefseqXP_010919706.10.0PREDICTED: transcription factor TCP4-like
SwissprotQ8LPR52e-87TCP4_ARATH; Transcription factor TCP4
TrEMBLM0SW951e-109M0SW95_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P06660_0011e-109(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58393355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.32e-72TCP family protein